Best Shopify Alternative in Indonesia 2026 — FlexiCommerce vs Shopify Full Comparison

If you are looking to start an online store in Indonesia, Shopify is probably one of the first names that comes to mind. It is the world's most popular ecommerce platform, used by millions of merchants globally. But is Shopify really the best choice for Indonesian businesses? When you factor in the USD-based pricing, recurring monthly fees, 2% transaction commission, and the cost of essential apps and themes, Shopify quickly becomes a very expensive proposition.

In this article, we will do a detailed FlexiCommerce vs Shopify comparison — covering pricing, features, mobile apps, payment gateways, shipping integrations, and Indonesia-specific capabilities. We will also look at how FlexiCommerce compares to other popular Indonesian ecommerce platforms like SIRCLO Store and Jubelio.

Why Look for a Shopify Alternative in Indonesia?

Shopify is a global platform — it was not built specifically for the Indonesian market. Here are the key problems Indonesian businesses face when using Shopify:

• USD-based pricing — Shopify charges in US dollars. The Basic plan costs $39/month (~Rp 630.000/month), and with the exchange rate, costs fluctuate unpredictably. Over a year, that is over Rp 7.500.000 just for the platform fee.
• 2% transaction commission — On top of your payment gateway fees (Xendit charges ~2.9%), Shopify takes an additional 2% commission on every sale unless you use Shopify Payments (not available in Indonesia).
• No mobile app included — A dedicated customer mobile app is essential in Indonesia where 73% of ecommerce happens on mobile. Shopify does not include one — third-party app builders cost $200+/month.
• Limited Indonesia-specific features — No native QRIS support, no built-in Xendit integration, limited Bahasa Indonesia support, no local shipping courier integration out of the box.
• Expensive themes and apps — Premium Shopify themes cost $250-$350 (Rp 4.000.000+). Essential apps like multi-vendor marketplace, loyalty programs, and advanced SEO can add $100-$300/month to your bill.
• No PPN compliance — Shopify does not natively handle Indonesia's PPN (Pajak Pertambahan Nilai) 11% tax system. You need third-party tax apps for proper invoicing.

FlexiCommerce — The Best Shopify Alternative for Indonesia

FlexiCommerce is a complete SaaS ecommerce platform purpose-built for the Indonesian market. It offers affordable monthly subscription pricing, 500+ features, 3 mobile apps, and deep integrations with Indonesian payment gateways and shipping providers — all at a fraction of what Shopify would cost.

Here is what makes FlexiCommerce stand out:

• Affordable subscription — Start at Rp 349.000/month for the Starter plan + affordable hosting from Rp 250.000/month. Save 20% with annual billing on the platform fee.
• 0% commission — FlexiCommerce never takes a cut of your sales. You only pay payment gateway fees to Xendit.
• 3 mobile apps included — Customer App (iOS + Android), Seller/Vendor App, and Delivery Partner App — all included in your plan.
• Xendit built-in — Native integration with Xendit supporting QRIS, credit/debit cards, bank transfer (VA), GoPay, OVO, DANA, ShopeePay, and more.
• Biteship built-in — 30+ courier partners including JNE, J&T Express, SiCepat, Ninja Xpress, GoSend, GrabExpress with auto rate comparison.
• PPN 11% compliant — Full tax invoicing with proper PPN calculation built into every order.

FlexiCommerce vs Shopify — Feature Comparison

Here is a side-by-side comparison of the two platforms across every major feature category:

3-Year Cost: FlexiCommerce vs Shopify

The real comparison comes when you look at the total cost of ownership over 3 years. Here is how the numbers stack up:

FlexiCommerce saves you over Rp 150.000.000 in 3 years compared to Shopify. That is more than 7x the cost difference. The money you save can be reinvested into marketing, inventory, and growing your business.

How Does FlexiCommerce Compare to SIRCLO and Jubelio?

Shopify is not the only alternative in the Indonesian market. Let us also compare FlexiCommerce with two popular local platforms — SIRCLO Store and Jubelio:

While SIRCLO Store is popular for connecting brands to Indonesian marketplaces (Tokopedia, Shopee, Lazada), it does not offer a standalone ecommerce website with custom mobile apps. Jubelio is primarily an omnichannel inventory management tool — great for marketplace sellers, but not a complete ecommerce platform. FlexiCommerce gives you everything in one package — your own website, mobile apps, admin panel, payments, and shipping.

Why Indonesian Businesses Need a Mobile App

Indonesia has over 210 million internet users, and 73% of them access the internet primarily through mobile devices. Mobile commerce accounts for more than 70% of all ecommerce transactions in the country. If your online store does not have a dedicated mobile app, you are leaving a massive amount of revenue on the table.

FlexiCommerce includes 3 mobile apps at no extra cost:

• Customer App — Native iOS and Android app with push notifications, voice search, wishlist, and gamification features that keep customers coming back.
• Seller/Vendor App — Vendors can manage their products, orders, and earnings directly from their phone. Perfect for multi-vendor marketplaces.
• Delivery Partner App — Delivery partners can accept, track, and manage deliveries in real-time. Ideal for hyperlocal delivery operations.

Who Should Choose FlexiCommerce?

• Small and medium businesses looking for an affordable, all-in-one ecommerce solution in Indonesia.
• D2C brands that want their own website and mobile app instead of relying solely on Tokopedia or Shopee.
• Entrepreneurs who want to avoid recurring monthly fees and unpredictable USD-based pricing.
• Multi-vendor marketplace builders who need a platform with built-in vendor management, commission system, and seller apps.
• Businesses needing Indonesian payment and shipping — Xendit (QRIS, GoPay, OVO, DANA) and Biteship (JNE, J&T, SiCepat) are built-in.
• WooCommerce users frustrated with plugin management, security vulnerabilities, and slow loading speeds who want a managed solution.

Conclusion

If you are running or starting an ecommerce business in Indonesia and you are looking for the best Shopify alternative, FlexiCommerce is the clear winner. Starting at just Rp 349.000/month + affordable hosting, zero commission on sales, 3 mobile apps included, Xendit payment gateway built-in, Biteship shipping with 30+ couriers, PPN 11% compliant invoicing, and 500+ features — all in one platform.

Stop paying Shopify's expensive monthly fees in USD. Stop losing 2% of every sale to platform commissions. Switch to FlexiCommerce and invest that money back into growing your Indonesian ecommerce business.